Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843061.1_cds_XP_016508622.1_21626
CDS Infomation

[gene=LOC107826181] [db_xref=GeneID:107826181] [protein=serine hydroxymethyltransferase 7-like] [protein_id=XP_016508622.1] [location=join(4617..5669,6745..7150,9364..9465,9561..9784)] [gbkey=CDS]
Sequence

ATGGATTTGAGCCAATCGCAATCGAGTAGTCTCTCGCTAGGGTTTATTGCTCATGCGTCC
CCGGCGGGAAGCGCACCTAATCGGGCTCATATCGCCGACGACTCGATCACTTTTCAGATC
GATTCTAGGGTTAAGGACCAATCGCATCTGGTTCCGCCGGTTCCACTTCAACTGATGGAC
AAGCAAACGGAGGAGAACGAGAAGAATGGGGGAGAGAGTGGGGATGAAGAGAGGGAAGTT
GAAGAATTTCGTATTCTAGGGCATTCTATGTGTATAAAGCGGAGGAGAGATACTGATAGC
ACGTCGTCTTCTTCGTCTTCGAAGAGCTTTAGGGTTACGAGTTCCAATGAGCATATGCTA
GGGCTAGAATCGCGAAAAAATGCTGTTAGGGCTTGGGGTAATCAGGGTTTACAGGTAGCT
GACCCGGATATATTTGAGATAATGGAGAAGGAGAAGCAGAGACAGTACAAAGGGATTGAA
CTGATTGCTTCTGAGAATTTTGTATGCAAGGCTGTGATGGAGGCATTAGGGAGCCATTTA
ACAAACAAGTATTCTGAAGGAGCACCAGGGGCAAGGTACTATGGTGGTAATCAGTTTATA
GATGAGATTGAGACTCTATGTTGTAAGCGTGCATTAGCTGCTTTTGGACTTGACCCAGAG
AATTGGGGTGTGAATGTGCAGCCATATTCATGTACTTCGGCAAACTTTGCGGTTTATACT
GGTTTGCTACTGCCTGGTGATCGGATAATGGGATTGGATACACCGTCTGGTGGAAACACA
AGTCATGGGTATTATCTTCCTAATGGAAGGAAAGTTTCAGGGGCTTCAATTTTCTTTGAG
AGTCTGTCTTATAAGGTTGACCCCCAAACTGGGCATGTAGATTTTGATAAGCTTGAGGAA
AGGGCTCTTGATTTCCGTCCTAAGATACTTATATGTGGGGGGAGTTCGTATCCCCGGGAA
TGGGATTATGCAAAGTTTAGACAGATTGCAGACAAATGTGGTGCAGTTTTGTTGTGTGAT
ATGGCACAAATTAGCGGTCTCATTGCTGCAAAGGAATGTGCGAGTCCCTTTGATTATTGT
GATATAGTTACTTCAACAACTCACAAAAGTCTTCGAGGTCCTAGGGGAGGTATTATCTTT
TATAGGAAAGGATCAAAGCCAAGAAAGAGAGGCCTGCTCTTGAATCAAGGTGATGGTGGT
GATAAGTATGATTTTGAGGAGAGGATAAACTTTGCTGTTTTTCCTGCATTGCAAGGAGGG
CCGCACAACAACCATATTGCTGCCCTCGCCATAGCATTGAAGCAAGTGGCTACTCCTGAA
TACAAGACATATATGCAACAAGTTAAGAGAAATGCTCAGGCATTAGCAGCTGCTTTATTG
AGAAGAAATTGCAGACTGGTTACTGGAGGGACTGACAATCACATGATACTGTGGGATCTG
AGAAATCTTGGGTTAACAGGTAAGAATTTTGAAAAGGTTTGCGAGTTGTGTTACATCACT
CTCAACAAAGTAATGGTCTTCGATGATTATGGAAGTATTACCCCTGGAGGTGTGAGGATA
GGTACCCCTGCTATGACATCCCGAGGCTGTATAGAGAGTGATTTTGAGACGATAACAGAT
TTCCTCCTCAAGGCAGCGCAGATTACAAATTCAGTACAGAGAGAACATGGAAAGCTCGCA
AAGGCTTTTCTGAAAGGCCTTGAGAACAACAAAGATGTTATCGAGTTACGAACACGTGTT
GAAAGTTTTGCATCCCTGTTTGCAATGCCTGGATTTGAAGTATAA

Peptide Sequence

PEP ID

XP_016508622.1
PEP Infomation

PREDICTED: serine hydroxymethyltransferase 7-like [Nicotiana tabacum]
Sequence

MDLSQSQSSSLSLGFIAHASPAGSAPNRAHIADDSITFQIDSRVKDQSHLVPPVPLQLMD
KQTEENEKNGGESGDEEREVEEFRILGHSMCIKRRRDTDSTSSSSSSKSFRVTSSNEHML
GLESRKNAVRAWGNQGLQVADPDIFEIMEKEKQRQYKGIELIASENFVCKAVMEALGSHL
TNKYSEGAPGARYYGGNQFIDEIETLCCKRALAAFGLDPENWGVNVQPYSCTSANFAVYT
GLLLPGDRIMGLDTPSGGNTSHGYYLPNGRKVSGASIFFESLSYKVDPQTGHVDFDKLEE
RALDFRPKILICGGSSYPREWDYAKFRQIADKCGAVLLCDMAQISGLIAAKECASPFDYC
DIVTSTTHKSLRGPRGGIIFYRKGSKPRKRGLLLNQGDGGDKYDFEERINFAVFPALQGG
PHNNHIAALAIALKQVATPEYKTYMQQVKRNAQALAAALLRRNCRLVTGGTDNHMILWDL
RNLGLTGKNFEKVCELCYITLNKVMVFDDYGSITPGGVRIGTPAMTSRGCIESDFETITD
FLLKAAQITNSVQREHGKLAKAFLKGLENNKDVIELRTRVESFASLFAMPGFEV

Transcript Sequence

Gene sequence data has not been registered.